Index

Symbols

--configfile mea-pl-run-snakefile command line option --debug mea-pl command line option --help mea-pl command line option --list mea-pl command line option --snakefile mea-pl-run-snakefile command line option --targets mea-pl-run-snakefile command line option

-c mea-pl-run-snakefile command line option -h mea-pl command line option -i mea-pl command line option -l mea-pl command line option -t mea-pl-run-snakefile command line option

E

environment variable MEA_PIPELINE_BASE MEA_PIPELINE_CMD_MODS MEA_PIPELINE_LOGLEVEL SNAKEFILE_PROFILE

M

mea-pl command line option --debug --help --list -h -i -l

mea-pl-run-snakefile command line option --configfile --snakefile --targets -c -t